| Rank | Team | Wins | Losses | Runs Scored | Runs Allowed | Bill James | Difference | Combined |
|---|---|---|---|---|---|---|---|---|
| 1 | Atlanta Braves | 101 | 61 | 791 | 581 | 103.467 | -2.467 | 126.214 |
| 2 | New York Yankees | 96 | 66 | 891 | 688 | 100.724 | -4.724 | 121.435 |
| 3 | Baltimore Orioles | 98 | 64 | 812 | 681 | 94.355 | 3.645 | 118.738 |
| 4 | Florida Marlins | 92 | 70 | 740 | 669 | 88.578 | 3.422 | 111.468 |
| 5 | Los Angeles Dodgers | 88 | 74 | 742 | 645 | 91.45 | -3.45 | 110.771 |
| 6 | Seattle Mariners | 90 | 72 | 925 | 833 | 89.381 | 0.619 | 110.729 |
| 7 | Houston Astros | 84 | 78 | 777 | 660 | 93.271 | -9.271 | 109.427 |
| 8 | New York Mets | 88 | 74 | 777 | 709 | 87.989 | 0.011 | 108.635 |
| 9 | Cleveland Indians | 86 | 75 | 868 | 815 | 85.467 | 0.533 | 106.501 |
| 10 | San Francisco Giants | 90 | 72 | 784 | 793 | 80.112 | 9.888 | 105.007 |
| 11 | Anaheim Angels | 84 | 78 | 829 | 794 | 84.383 | -0.383 | 103.940 |
| 12 | Colorado Rockies | 83 | 79 | 923 | 908 | 82.331 | 0.669 | 102.056 |
| 13 | Detroit Tigers | 79 | 83 | 784 | 790 | 80.407 | -1.407 | 98.399 |
| 14 | Boston Red Sox | 78 | 84 | 851 | 857 | 80.441 | -2.441 | 97.803 |
| 15 | Texas Rangers | 77 | 85 | 807 | 823 | 79.458 | -2.458 | 96.579 |
| 16 | Pittsburgh Pirates | 79 | 83 | 725 | 760 | 77.396 | 1.604 | 96.541 |
| 17 | Chicago White Sox | 80 | 81 | 779 | 833 | 75.282 | 4.718 | 96.448 |
| 18 | Montreal Expos | 78 | 84 | 691 | 740 | 75.822 | 2.178 | 94.952 |
| 19 | Milwaukee Brewers | 78 | 83 | 681 | 742 | 74.06 | 3.94 | 94.447 |
| 20 | Toronto Blue Jays | 76 | 86 | 654 | 694 | 76.588 | -0.588 | 94.190 |
| 21 | St. Louis Cardinals | 73 | 89 | 689 | 708 | 78.956 | -5.956 | 93.800 |
| 22 | San Diego Padres | 76 | 86 | 795 | 891 | 71.994 | 4.006 | 91.354 |
| 23 | Cincinnati Reds | 76 | 86 | 651 | 764 | 69.014 | 6.986 | 89.515 |
| 24 | Chicago Cubs | 68 | 94 | 687 | 759 | 73.456 | -5.456 | 87.319 |
| 25 | Kansas City Royals | 67 | 94 | 747 | 820 | 73.308 | -6.308 | 87.148 |
| 26 | Minnesota Twins | 68 | 94 | 772 | 861 | 72.455 | -4.455 | 86.701 |
| 27 | Philadelphia Phillies | 68 | 94 | 668 | 840 | 63.669 | 4.331 | 81.277 |
| 28 | Oakland Athletics | 65 | 97 | 764 | 946 | 64.227 | 0.773 | 79.770 |